Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| alpha-amylase family protein | M5M_RS06710 | P22630 | - | 1528474 - 1529883 | 52623.2 |
| abc transporter substrate-binding protein | M5M_RS06715 | Not Available | - | 1530145 - 1530867 | 26961.4 |
| nudix hydrolase | M5M_RS19405 | Not Available | - | 1531004 - 1531474 | 16733.3 |
| yigz family protein | M5M_RS06725 | P27862 | - | 1531468 - 1532103 | 22888.1 |
| duf6942 family protein | M5M_RS06730 | Not Available | - | 1532100 - 1532636 | 19796.8 |
| methyltransferase | M5M_RS06735 | Not Available | - | 1532633 - 1533793 | 43577.2 |
| tonb-dependent receptor domain-containing protein | M5M_RS06740 | Not Available | - | 1534054 - 1536738 | 98938.4 |
| hypothetical protein | M5M_RS06745 | Not Available | - | 1536853 - 1538433 | 54530.7 |
| eal domain-containing protein | M5M_RS19410 | Not Available | + | 1538730 - 1542365 | 135258.0 |
| peptidylprolyl isomerase | M5M_RS06755 | Q9CKP2 | - | 1542736 - 1543230 | 18188.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.