Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| liaf transmembrane domain-containing protein | M5M_RS06660 | Not Available | + | 1512592 - 1513377 | 27479.8 |
| sensor histidine kinase | M5M_RS06665 | P0AA94 | + | 1513464 - 1514483 | 38005.3 |
| lyttr family dna-binding domain-containing protein | M5M_RS06670 | Q87K77 | + | 1514480 - 1515232 | 28083.6 |
| vcbs repeat-containing protein | M5M_RS06675 | Not Available | + | 1515409 - 1516908 | 54648.5 |
| diguanylate cyclase | M5M_RS06680 | Not Available | - | 1516905 - 1517978 | 39356.1 |
| nramp family divalent metal transporter | M5M_RS06685 | Q98I99 | - | 1518018 - 1519202 | 40589.3 |
| fdhf/ydep family oxidoreductase | M5M_RS06690 | P9WJP8 | + | 1519340 - 1521526 | 79310.0 |
| tonb-dependent receptor | M5M_RS06695 | Q8DD41 | + | 1521526 - 1523598 | 76035.6 |
| atp-dependent helicase hrpb | M5M_RS06700 | P37024 | - | 1523623 - 1526133 | 90913.6 |
| glycosyl hydrolase family 18 protein | M5M_RS20965 | Not Available | + | 1526289 - 1528331 | 71107.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.