Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS19395 | Not Available | - | 1500399 - 1500995 | 20131.2 |
| thrombospondin type 3 repeat-containing protein | M5M_RS20115 | Not Available | - | 1501034 - 1502752 | 57643.9 |
| hotdog fold domain-containing protein | M5M_RS06620 | Not Available | + | 1503140 - 1503604 | 17215.9 |
| hypothetical protein | M5M_RS06625 | Not Available | + | 1503865 - 1504518 | 24476.1 |
| alpha-amylase family glycosyl hydrolase | M5M_RS06630 | P31797 | + | 1504792 - 1508007 | 116412.0 |
| carbohydrate-binding protein | M5M_RS06635 | Not Available | - | 1508039 - 1509091 | 39521.7 |
| pilz domain-containing protein | M5M_RS06640 | Not Available | - | 1509432 - 1509839 | 14771.6 |
| duf1631 family protein | M5M_RS06645 | Not Available | - | 1509869 - 1511533 | 60429.4 |
| fkbp-type peptidyl-prolyl cis-trans isomerase | M5M_RS06650 | P56989 | - | 1511618 - 1511968 | 12538.0 |
| duf4389 domain-containing protein | M5M_RS19400 | Not Available | + | 1512123 - 1512566 | 16257.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.