Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS06560 | Not Available | + | 1478970 - 1479806 | 31375.7 |
| pa14 domain-containing protein | M5M_RS06565 | Not Available | + | 1480113 - 1485020 | 177681.0 |
| nuclear transport factor 2 family protein | M5M_RS06570 | Not Available | + | 1485196 - 1485657 | 17295.6 |
| sugar porter family mfs transporter | M5M_RS06575 | Not Available | - | 1485772 - 1487223 | 51542.8 |
| carbohydrate-binding protein | M5M_RS20960 | W8QRE4 | - | 1487289 - 1489874 | 93248.0 |
| beta-glucosidase bglx | M5M_RS06585 | Q56078 | - | 1490173 - 1492455 | 82146.1 |
| cellulase family glycosylhydrolase | M5M_RS06590 | Q5B5X8 | - | 1492597 - 1495158 | 92949.5 |
| tonb-dependent receptor | M5M_RS06595 | Not Available | - | 1495214 - 1497619 | 87503.9 |
| helix-turn-helix domain-containing protein | M5M_RS06600 | Not Available | - | 1498035 - 1499081 | 39994.5 |
| rlua family pseudouridine synthase | M5M_RS06605 | P44445 | - | 1499307 - 1500233 | 34286.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.