Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| l-threonine 3-dehydrogenase | M5M_RS06510 | Q02BT1 | - | 1466587 - 1467612 | 37216.1 |
| hypothetical protein | M5M_RS06515 | Not Available | - | 1467791 - 1468771 | 36065.5 |
| helix-turn-helix domain-containing protein | M5M_RS06520 | Not Available | - | 1468967 - 1469602 | 23752.2 |
| aminomethyl-transferring glycine dehydrogenase | M5M_RS06525 | Q21HU3 | + | 1469846 - 1472716 | 104478.0 |
| hypothetical protein | M5M_RS06530 | Not Available | + | 1473037 - 1473477 | 16312.2 |
| hypothetical protein | M5M_RS06535 | Not Available | + | 1473487 - 1474521 | 37178.6 |
| abc-f family atpase | M5M_RS06540 | P0A9U5 | + | 1474756 - 1476357 | 59200.9 |
| hypothetical protein | M5M_RS06545 | Not Available | + | 1476654 - 1476875 | 8526.08 |
| hypothetical protein | M5M_RS06550 | Not Available | + | 1476955 - 1477230 | 9714.71 |
| hypothetical protein | M5M_RS06555 | Not Available | + | 1477759 - 1478970 | 43485.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.