Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| spondin domain-containing protein | M5M_RS06355 | Not Available | - | 1426548 - 1427291 | 25425.9 |
| spondin domain-containing protein | M5M_RS06360 | Not Available | - | 1427300 - 1428004 | 23733.2 |
| s9 family peptidase | M5M_RS06365 | Q6F3I7 | + | 1428155 - 1430377 | 83300.4 |
| aspartate/glutamate racemase family protein | M5M_RS06370 | A0A0H3JGH6 | + | 1431055 - 1431747 | 25093.4 |
| heparan-alpha-glucosaminide n-acetyltransferase domain-containing protein | M5M_RS06375 | Not Available | - | 1431775 - 1432890 | 40757.2 |
| hypothetical protein | M5M_RS06380 | Not Available | - | 1432900 - 1433610 | 26072.6 |
| gnat family n-acetyltransferase | M5M_RS06385 | Q76BS5 | - | 1433612 - 1436071 | 92846.9 |
| mfs transporter | M5M_RS06390 | Not Available | - | 1436064 - 1437290 | 44486.8 |
| lysine n(6)-hydroxylase/l-ornithine n(5)-oxygenase family protein | M5M_RS06395 | Q44740 | - | 1437290 - 1438621 | 50906.5 |
| smi1/knr4 family protein | M5M_RS06405 | Not Available | - | 1439028 - 1439438 | 15592.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.