Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| bifunctional protein-serine/threonine kinase/phosphatase | M5M_RS06205 | O34507 | - | 1390378 - 1392147 | 65489.2 |
| nark family nitrate/nitrite mfs transporter | M5M_RS06210 | B1XLL7 | - | 1392251 - 1393720 | 52916.6 |
| nitrite reductase small subunit nird | M5M_RS06215 | P0A230 | - | 1394201 - 1394524 | 11452.8 |
| nitrite reductase large subunit nirb | M5M_RS06220 | P08201 | - | 1394573 - 1397119 | 92673.4 |
| uroporphyrinogen-iii c-methyltransferase | M5M_RS06225 | Q02NA3 | - | 1397134 - 1398012 | 30945.2 |
| molybdopterin oxidoreductase family protein | M5M_RS06230 | P73448 | + | 1398538 - 1400787 | 84494.6 |
| dmsc/ynfh family molybdoenzyme membrane anchor subunit | M5M_RS06235 | P0AAJ3 | + | 1400954 - 1402972 | 73301.6 |
| hypothetical protein | M5M_RS06240 | Not Available | + | 1403022 - 1403393 | 13826.2 |
| hypothetical protein | M5M_RS06245 | Not Available | + | 1403468 - 1403854 | 14418.4 |
| gtp 3',8-cyclase moaa | M5M_RS06250 | A1U578 | + | 1403857 - 1404837 | 36396.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.