Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| restriction endonuclease subunit s | M5M_RS19380 | P06991 | - | 1366300 - 1367460 | 44311.2 |
| class i sam-dependent dna methyltransferase | M5M_RS06110 | P10484 | - | 1367525 - 1368952 | 54356.8 |
| class i sam-dependent dna methyltransferase | M5M_RS06115 | Q60297 | - | 1368949 - 1370448 | 56385.3 |
| hit family protein | M5M_RS06120 | P75504 | - | 1370596 - 1371012 | 15323.0 |
| winged helix-turn-helix domain-containing protein | M5M_RS06125 | Not Available | + | 1371749 - 1372108 | 13203.3 |
| nucleotidyltransferase | M5M_RS06130 | Not Available | + | 1372118 - 1372717 | 22347.1 |
| fad-binding oxidoreductase | M5M_RS06135 | P37906 | - | 1372855 - 1374153 | 47520.1 |
| hypothetical protein | M5M_RS06140 | Not Available | + | 1374533 - 1374850 | 11817.0 |
| s8 family peptidase | M5M_RS20955 | P16588 | - | 1374975 - 1376819 | 62649.2 |
| Trna-pro | Not Available | Not Available | + | 1377567 - 1377643 | Not Available |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.