Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| protein adenylyltransferase fic | M5M_RS06045 | Q8E9K5 | - | 1355134 - 1356240 | 41116.6 |
| duf1240 domain-containing protein | M5M_RS06050 | Not Available | - | 1356509 - 1357105 | 22199.4 |
| hypothetical protein | M5M_RS06065 | Not Available | + | 1357897 - 1358337 | 16359.3 |
| hypothetical protein | M5M_RS06070 | Not Available | - | 1358430 - 1358963 | 19956.3 |
| ahh domain-containing protein | M5M_RS06075 | Not Available | + | 1359253 - 1359864 | 23147.9 |
| imm11 family protein | M5M_RS06080 | Not Available | + | 1359857 - 1360399 | 20526.1 |
| hypothetical protein | M5M_RS19375 | Not Available | + | 1360485 - 1361039 | 20959.0 |
| hypothetical protein | M5M_RS06090 | Not Available | - | 1361506 - 1361856 | 13276.1 |
| dgtp triphosphohydrolase | M5M_RS06095 | Q9I4L1 | - | 1361853 - 1363226 | 51657.9 |
| type i restriction endonuclease subunit r | M5M_RS06100 | Q60295 | - | 1363236 - 1366298 | 116149.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.