Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| fad-binding oxidoreductase | M5M_RS05945 | Q9Z3S3 | + | 1330362 - 1331708 | 48885.9 |
| hypothetical protein | M5M_RS05950 | Not Available | + | 1331743 - 1332129 | 14205.2 |
| had family hydrolase | M5M_RS05955 | Not Available | + | 1332126 - 1332719 | 22327.9 |
| hypothetical protein | M5M_RS20315 | Not Available | - | 1332702 - 1332869 | 6083.23 |
| c-type cytochrome | M5M_RS05960 | P82903 | + | 1333060 - 1333368 | 10331.5 |
| pqq-dependent sugar dehydrogenase | M5M_RS05965 | P73001 | - | 1333538 - 1334659 | 40597.5 |
| hypothetical protein | M5M_RS05970 | Not Available | + | 1334672 - 1335115 | 15503.5 |
| hypothetical protein | M5M_RS05975 | Not Available | - | 1335079 - 1335597 | 19428.3 |
| shlb/fhac/hecb family hemolysin secretion/activation protein | M5M_RS05980 | Not Available | + | 1335884 - 1337458 | 58612.9 |
| filamentous hemagglutinin n-terminal domain-containing protein | M5M_RS05985 | P44602 | + | 1337467 - 1343748 | 212142.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.