Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3549 family protein | M5M_RS05895 | Not Available | + | 1311794 - 1312834 | 38077.5 |
| hypothetical protein | M5M_RS05900 | Not Available | - | 1312976 - 1314229 | 43592.9 |
| choice-of-anchor d domain-containing protein | M5M_RS05905 | Not Available | - | 1314242 - 1316767 | 90495.7 |
| sulfotransferase | M5M_RS05910 | O67178 | - | 1316877 - 1318199 | 49430.9 |
| tonb-dependent receptor | M5M_RS05915 | A5F9G0 | - | 1318519 - 1320957 | 88636.1 |
| carbon-nitrogen hydrolase family protein | M5M_RS05920 | Q557J5 | - | 1321039 - 1321923 | 32571.0 |
| plp-dependent aminotransferase family protein | M5M_RS05925 | D5AKX9 | - | 1322089 - 1323903 | 67558.2 |
| tonb-dependent receptor | M5M_RS05930 | Not Available | - | 1324093 - 1326426 | 86011.1 |
| sulfotransferase | M5M_RS05935 | Not Available | - | 1326455 - 1328053 | 59984.2 |
| na+/h+ antiporter nhac family protein | M5M_RS05940 | Not Available | + | 1328342 - 1330303 | 70216.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.