Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | M5M_RS00560 | P96194 | - | 122146 - 123039 | 32922.6 |
| 3-isopropylmalate dehydratase large subunit | M5M_RS00565 | B3PFN2 | + | 123209 - 124627 | 50540.6 |
| 3-isopropylmalate dehydratase small subunit | M5M_RS00570 | B3PFN3 | + | 124637 - 125293 | 24413.9 |
| 3-isopropylmalate dehydrogenase | M5M_RS00575 | Q21IY5 | + | 125312 - 126385 | 38344.7 |
| aspartate-semialdehyde dehydrogenase | M5M_RS00580 | Q51344 | + | 126426 - 127535 | 39718.2 |
| fimv/hubp family polar landmark protein | M5M_RS00585 | Q9HZA6 | + | 128013 - 131009 | 107447.0 |
| trna pseudouridine(38-40) synthase trua | M5M_RS00590 | O87016 | + | 131139 - 131972 | 30711.9 |
| phosphoribosylanthranilate isomerase | M5M_RS00595 | B3PFN8 | + | 132061 - 132708 | 22555.9 |
| tryptophan synthase subunit beta | M5M_RS00600 | Q6FEF1 | + | 132763 - 134001 | 44451.0 |
| tryptophan synthase subunit alpha | M5M_RS00605 | B8GQE5 | + | 134032 - 134841 | 28241.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.