Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf819 domain-containing protein | M5M_RS05845 | Not Available | + | 1295862 - 1297091 | 43805.5 |
| ggdef domain-containing protein | M5M_RS05850 | Q8Z5R0 | - | 1297085 - 1299370 | 85399.5 |
| efflux rnd transporter permease subunit | M5M_RS05855 | Q849R0 | - | 1299471 - 1302644 | 118138.0 |
| efflux rnd transporter periplasmic adaptor subunit | M5M_RS05860 | Not Available | - | 1302658 - 1303887 | 44438.8 |
| hypothetical protein | M5M_RS05865 | Not Available | - | 1304175 - 1305953 | 60497.0 |
| atp-dependent dna helicase ding | M5M_RS05870 | P29741 | - | 1306135 - 1308255 | 77465.7 |
| hypothetical protein | M5M_RS05875 | Not Available | + | 1308344 - 1308781 | 15890.2 |
| 1-acyl-sn-glycerol-3-phosphate acyltransferase | M5M_RS05880 | Not Available | - | 1308775 - 1309929 | 43461.0 |
| ychj family protein | M5M_RS20680 | B2VKX1 | + | 1310039 - 1310491 | 16675.6 |
| aminotransferase class v-fold plp-dependent enzyme | M5M_RS05890 | Not Available | - | 1310508 - 1311701 | 43723.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.