Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS05805 | Not Available | - | 1280244 - 1280669 | 16091.5 |
| slatt domain-containing protein | M5M_RS05810 | Not Available | - | 1281574 - 1282062 | 18564.4 |
| nucleoside deaminase | M5M_RS19840 | Not Available | - | 1283126 - 1283980 | 32197.0 |
| hypothetical protein | M5M_RS20110 | Not Available | - | 1284087 - 1284650 | 20895.8 |
| dihydrolipoyllysine-residue acetyltransferase | M5M_RS05815 | Q59638 | - | 1285077 - 1286699 | 55487.7 |
| pyruvate dehydrogenase (acetyl-transferring), homodimeric type | M5M_RS05820 | Q59637 | - | 1286738 - 1289401 | 99426.8 |
| insulinase family protein | M5M_RS05825 | P14735 | - | 1289798 - 1292644 | 106004.0 |
| ai-2e family transporter | M5M_RS05830 | P43969 | - | 1292637 - 1293707 | 39378.6 |
| sulfurtransferase tusa family protein | M5M_RS05835 | D3RPC0 | - | 1293753 - 1294013 | 9172.07 |
| m48 family metalloprotease | M5M_RS05840 | P66948 | + | 1294174 - 1295637 | 53787.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.