Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | M5M_RS05710 | Not Available | - | 1258860 - 1259189 | 11784.3 |
| s9 family peptidase | M5M_RS05715 | O07834 | - | 1259329 - 1261485 | 81083.2 |
| right-handed parallel beta-helix repeat-containing protein | M5M_RS05720 | Not Available | + | 1261846 - 1263303 | 50362.2 |
| amidohydrolase family protein | M5M_RS05725 | Not Available | - | 1263367 - 1264800 | 52418.1 |
| helix-turn-helix domain-containing protein | M5M_RS05730 | Not Available | - | 1264860 - 1265924 | 39390.0 |
| hypothetical protein | M5M_RS05735 | Not Available | + | 1266040 - 1266648 | 22764.7 |
| pectin acetylesterase-family hydrolase | M5M_RS05740 | Not Available | - | 1266681 - 1267823 | 42566.4 |
| hypothetical protein | M5M_RS05745 | Not Available | + | 1268560 - 1269330 | 28324.0 |
| protein kinase domain-containing protein | M5M_RS19365 | Q8G6P9 | + | 1269597 - 1271129 | 56345.8 |
| lruc domain-containing protein | M5M_RS05755 | Not Available | + | 1271317 - 1272939 | 60751.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.