Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| leucyl aminopeptidase | M5M_RS05660 | C5BMG6 | + | 1245593 - 1247065 | 51363.0 |
| dna polymerase iii subunit chi | M5M_RS05665 | Not Available | + | 1247065 - 1247484 | 15641.5 |
| hypothetical protein | M5M_RS05670 | Not Available | + | 1247500 - 1248456 | 34399.1 |
| valine--trna ligase | M5M_RS05675 | Q9HXH0 | + | 1248506 - 1251268 | 104844.0 |
| hypothetical protein | M5M_RS05680 | Not Available | + | 1251524 - 1252486 | 35089.5 |
| duf2789 domain-containing protein | M5M_RS05685 | Not Available | - | 1252508 - 1252744 | 9068.71 |
| porin family protein | M5M_RS05690 | Not Available | + | 1252964 - 1253506 | 18865.0 |
| tonb-dependent receptor | M5M_RS05695 | Not Available | - | 1253566 - 1256541 | 106515.0 |
| pilt/pilu family type 4a pilus atpase | M5M_RS05700 | Not Available | + | 1256868 - 1258049 | 43722.2 |
| outer membrane beta-barrel protein | M5M_RS05705 | Not Available | + | 1258248 - 1258796 | 19186.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.