Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| duf3108 domain-containing protein | M5M_RS05610 | Not Available | + | 1237223 - 1237993 | 29329.1 |
| peptidylprolyl isomerase | M5M_RS05615 | Q9KNX6 | + | 1238041 - 1238529 | 17286.0 |
| periplasmic nitrate reductase, nape protein | M5M_RS05620 | Not Available | + | 1238698 - 1238871 | 6223.59 |
| ferredoxin-type protein napf | M5M_RS05625 | Not Available | + | 1238882 - 1239349 | 16382.7 |
| chaperone napd | M5M_RS05630 | Not Available | + | 1239346 - 1239651 | 10652.7 |
| nitrate reductase catalytic subunit napa | M5M_RS05635 | Q6LQJ3 | + | 1239638 - 1242124 | 92976.4 |
| nitrate reductase cytochrome c-type subunit | M5M_RS05640 | Q8KY07 | + | 1242135 - 1242587 | 16948.2 |
| cytochrome c3 family protein | M5M_RS05645 | Q56352 | + | 1242596 - 1243183 | 22650.1 |
| lps export abc transporter permease lptg | M5M_RS05650 | P0ADC7 | - | 1243233 - 1244297 | 39290.2 |
| lps export abc transporter permease lptf | M5M_RS05655 | P45333 | - | 1244290 - 1245420 | 41705.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.