Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| substrate-binding domain-containing protein | M5M_RS05460 | Not Available | + | 1211800 - 1213158 | 49074.5 |
| hypothetical protein | M5M_RS19835 | Not Available | - | 1213166 - 1213585 | 15366.4 |
| ompa family protein | M5M_RS05470 | P37665 | - | 1213582 - 1214238 | 22599.8 |
| leucine-rich repeat domain-containing protein | M5M_RS05475 | Not Available | + | 1214401 - 1214910 | 18645.4 |
| pilz domain-containing protein | M5M_RS05480 | Not Available | - | 1214920 - 1215192 | 10057.2 |
| peroxiredoxin | M5M_RS05485 | P21762 | - | 1215959 - 1216561 | 21678.8 |
| bacterioferritin-associated ferredoxin | M5M_RS05490 | Not Available | + | 1216862 - 1217068 | 7123.66 |
| bacterioferritin | M5M_RS05495 | P22759 | + | 1217224 - 1217694 | 18041.7 |
| hit domain-containing protein | M5M_RS05500 | Not Available | - | 1217720 - 1218142 | 15733.0 |
| proline--trna ligase | M5M_RS05505 | C5BPN9 | + | 1218308 - 1220032 | 62641.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.