Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| tryptophan halogenase family protein | M5M_RS05410 | Not Available | - | 1201645 - 1203144 | 54782.1 |
| dihydrofolate reductase family protein | M5M_RS05415 | Not Available | - | 1203211 - 1203753 | 19816.8 |
| l-serine ammonia-lyase | M5M_RS05420 | O86564 | + | 1203929 - 1205317 | 48975.2 |
| dna-3-methyladenine glycosylase | M5M_RS05425 | Not Available | + | 1205426 - 1206040 | 23195.2 |
| hemerythrin domain-containing protein | M5M_RS19345 | Not Available | - | 1206041 - 1206652 | 23378.1 |
| deoxyribodipyrimidine photo-lyase | M5M_RS05435 | P25078 | - | 1206750 - 1208177 | 54069.7 |
| duf1722 domain-containing protein | M5M_RS05440 | P24252 | - | 1208183 - 1209181 | 37137.2 |
| hypothetical protein | M5M_RS20095 | Not Available | + | 1209250 - 1209534 | 10546.4 |
| class i sam-dependent methyltransferase | M5M_RS05450 | B3PLF9 | - | 1209538 - 1210350 | 29146.1 |
| xaa-pro peptidase family protein | M5M_RS05455 | Q2FG30 | - | 1210372 - 1211580 | 43399.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.