Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferase | M5M_RS05360 | A6V1C2 | + | 1187255 - 1188274 | 35288.6 |
| pas domain-containing protein | M5M_RS05365 | P0AEC3 | - | 1188335 - 1191268 | 109055.0 |
| succinyl-diaminopimelate desuccinylase | M5M_RS05370 | B3PBB9 | + | 1191380 - 1192510 | 40417.1 |
| oxygen-independent coproporphyrinogen iii oxidase | M5M_RS05375 | P77915 | + | 1192595 - 1193980 | 52072.2 |
| cyclic pyranopterin monophosphate synthase moac | M5M_RS05380 | B1KP09 | + | 1194013 - 1194504 | 17497.2 |
| molybdopterin converting factor subunit 1 | M5M_RS05385 | P30748 | + | 1194497 - 1194745 | 8838.51 |
| molybdopterin synthase catalytic subunit moae | M5M_RS05390 | Q9KT77 | + | 1194747 - 1195202 | 17085.2 |
| tonb-dependent receptor | M5M_RS05395 | Not Available | + | 1195526 - 1198510 | 107761.0 |
| tryptophan halogenase family protein | M5M_RS05400 | Not Available | + | 1198611 - 1200143 | 56555.8 |
| tryptophan halogenase family protein | M5M_RS05405 | Not Available | + | 1200140 - 1201660 | 56294.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.