Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | M5M_RS05260 | A9MPI0 | - | 1166746 - 1167516 | 27443.1 |
| acyl-acp--udp-n-acetylglucosamine o-acyltransferase | M5M_RS05265 | A4VJT3 | - | 1167528 - 1168331 | 28551.3 |
| 3-hydroxyacyl-acp dehydratase fabz | M5M_RS05270 | B3PBQ9 | - | 1168368 - 1168805 | 16156.7 |
| udp-3-o-(3-hydroxymyristoyl)glucosamine n-acyltransferase | M5M_RS05275 | Q1I636 | - | 1168842 - 1169861 | 35037.6 |
| omph family outer membrane protein | M5M_RS05280 | Not Available | - | 1169955 - 1170458 | 18225.1 |
| outer membrane protein assembly factor bama | M5M_RS05285 | C5B7R5 | - | 1170497 - 1173151 | 98880.8 |
| rip metalloprotease rsep | M5M_RS05290 | Q9HXY3 | - | 1173215 - 1174570 | 49266.2 |
| 1-deoxy-d-xylulose-5-phosphate reductoisomerase | M5M_RS05295 | B3PBQ4 | - | 1174581 - 1175771 | 41966.1 |
| phosphatidate cytidylyltransferase | M5M_RS05300 | Q59640 | - | 1175768 - 1176601 | 29954.3 |
| polyprenyl diphosphate synthase | M5M_RS05305 | Q9HXY2 | - | 1176594 - 1177289 | 25715.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.