Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| degt/dnrj/eryc1/strs aminotransferase family protein | M5M_RS05210 | P15263 | + | 1155310 - 1156404 | 39482.4 |
| lipid-a-disaccharide synthase | M5M_RS05215 | Q74AT9 | + | 1156401 - 1157546 | 42552.8 |
| lysr family transcriptional regulator | M5M_RS05220 | A0A0H2ZDG9 | - | 1157574 - 1158473 | 33212.5 |
| sdr family oxidoreductase | M5M_RS05225 | Not Available | + | 1158574 - 1159425 | 31687.4 |
| catalase/peroxidase hpi | M5M_RS05230 | B3PC77 | + | 1159700 - 1161883 | 80698.5 |
| duf6265 family protein | M5M_RS05235 | Not Available | + | 1161973 - 1162503 | 19628.3 |
| amidohydrolase family protein | M5M_RS05240 | G3XP38 | + | 1162536 - 1163768 | 43066.6 |
| aminotransferase class v-fold plp-dependent enzyme | M5M_RS05245 | Not Available | - | 1163758 - 1165206 | 53517.5 |
| lrp/asnc family transcriptional regulator | M5M_RS05250 | P0ACJ7 | + | 1165346 - 1165798 | 17241.8 |
| lpxl/lpxp family kdo(2)-lipid iv(a) lauroyl/palmitoleoyl acyltransferase | M5M_RS05255 | P0ACV1 | - | 1165829 - 1166746 | 34569.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.