Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| type vi secretion system contractile sheath domain-containing protein | M5M_RS05110 | Q9I748 | + | 1136567 - 1138048 | 54079.8 |
| dna-3-methyladenine glycosylase i | M5M_RS05115 | P05100 | + | 1138169 - 1138774 | 22928.5 |
| osmc family protein | M5M_RS05120 | Not Available | + | 1138784 - 1139245 | 16910.9 |
| hypothetical protein | M5M_RS05125 | Not Available | + | 1139255 - 1139482 | 8272.16 |
| tm2 domain-containing protein | M5M_RS05130 | Not Available | + | 1139681 - 1140052 | 14691.8 |
| lysozyme inhibitor lpri family protein | M5M_RS19335 | Not Available | + | 1140049 - 1140522 | 17501.5 |
| dmt family transporter | M5M_RS05140 | Not Available | + | 1140642 - 1141604 | 34388.7 |
| hypothetical protein | M5M_RS05145 | Not Available | + | 1141644 - 1142486 | 30728.4 |
| hypothetical protein | M5M_RS05150 | Not Available | + | 1142519 - 1142797 | 10469.3 |
| m28 family metallopeptidase | M5M_RS05155 | E5A6Z0 | + | 1142812 - 1144164 | 49283.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.