Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Cellvibrionales
Family
Cellvibrionaceae
Genus
Simiduia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Cellvibrionales |
| Family | Cellvibrionaceae |
| Genus | Simiduia |
| Species | Simiduia agarivorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | aerobic |
| Optimal temperature | 32 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | organotroph; chemotroph |
| Pathogenicity | Not Available |
Genome Summary
Simiduia agarivorans SA1 = DSM 21679
Accession NumberNC_018868.3
Gene Summary
Adenine Count
951810 bp
Thymine Count
947571 bp
Guanine Count
1201677 bp
Cytosine Count
1199168 bp
Genome Length
4300227 bp
Protein-coding Genes
3817 genes
Non-Coding Genes
51 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| pepsy domain-containing protein | M5M_RS05010 | Not Available | - | 1112602 - 1113342 | 27754.9 |
| fmn-binding protein | M5M_RS05015 | Not Available | - | 1113279 - 1113854 | 20911.1 |
| porin | M5M_RS05020 | O67300 | - | 1113906 - 1115138 | 45098.4 |
| slc13 family permease | M5M_RS05025 | P72958 | - | 1115280 - 1117082 | 65020.6 |
| grx4 family monothiol glutaredoxin | M5M_RS05030 | P0AC71 | - | 1117246 - 1117569 | 11973.5 |
| flavohemoglobin expression-modulating qegla motif protein | M5M_RS05035 | Not Available | + | 1117765 - 1119048 | 47592.1 |
| acetylornithine transaminase | M5M_RS05040 | Q82UP3 | + | 1119176 - 1120351 | 41105.4 |
| ornithine carbamoyltransferase | M5M_RS05045 | Q606D8 | + | 1120390 - 1121313 | 34402.0 |
| glycosyltransferase family 4 protein | M5M_RS05050 | Not Available | - | 1121332 - 1122561 | 45573.6 |
| asparaginase domain-containing protein | M5M_RS05055 | Not Available | + | 1122652 - 1123134 | 17502.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.