Gordonia otitidis NBRC 100426

sphereaerobic / microaerophile

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Gordoniaceae

Genus

Gordonia

Description

Gordonia otitidis NBRC 100426 is a Gram-positive, spherical bacterium that exhibits aerobic to microaerophilic growth characteristics, thriving optimally at a temperature of 29.0°C. This microorganism belongs to the genus Gordonia, which is known for its ability to degrade a variety of complex organic compounds, particularly in environments rich in hydrocarbons. The Gram-positive nature of Gordonia otitidis suggests a thick peptidoglycan layer in its cell wall, which may contribute to its resilience in various environmental conditions. The optimal growth temperature of 29.0°C indicates that this bacterium is well-adapted to moderate temperature environments, potentially reflecting its ecological niche. As an aerobic organism, Gordonia otitidis likely plays a role in biogeochemical cycles, particularly in the degradation of organic matter in oxygen-rich habitats. Furthermore, its microaerophilic capabilities suggest that it may thrive in environments with fluctuating oxygen levels, allowing it to exploit specific ecological niches where competition for resources is less intense. Understanding the metabolic pathways and ecological roles of Gordonia otitidis can provide insights into its potential applications in bioremediation, particularly in the treatment of contaminated environments. Its unique adaptations underscore the diverse strategies that microorganisms employ to survive and flourish in varied ecological contexts.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyGordoniaceae
GenusGordonia
SpeciesGordonia otitidis
StrainNBRC 100426

Profile

Physiology
Gram staining propertiesGram-positive
Shapesphere
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic / microaerophile
Optimal temperature29
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Gordonia otitidis NBRC 100426


Gene Summary

Adenine Count

913945 bp

Thymine Count

917299 bp

Guanine Count

1735993 bp

Cytosine Count

1728657 bp

Genome Length

5295895 bp

Protein-coding Genes

4936 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
hypothetical proteinGOOTI_065_00330Not Available-1278675 - 127991944284.7
3-oxoadipate enol-lactonaseGOOTI_065_00340Not Available-1279916 - 128020010443.5
hypothetical proteinGOOTI_065_00350Not Available-1280197 - 12804488934.56
hypothetical proteinGOOTI_065_00360Not Available-1280445 - 12806607868.86
Helix-turn-helix dna binding domain proteinGOOTI_065_00370Not Available-1280657 - 12808577379.86
IntegraseGOOTI_065_00380Not Available-1281415 - 128259043737.9
AttrNot AvailableNot Available+1282742 - 1282767Not Available
d-alanine--d-alanine ligaseGOOTI_001_00010Not Available+1 - 50418504.8
16s ribosomal rnaNot AvailableNot Available+80 - 1596Not Available
23s ribosomal rnaNot AvailableNot Available+146 - 3277Not Available

Displaying genes 11 – 20 of 4997 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites