Pyrobaculum ferrireducens str. 1860

Kingdom

Thermoproteati

Phylum

Thermoproteota

Class

Thermoprotei

Order

Thermoproteales

Family

Thermoproteaceae

Genus

Pyrobaculum

Description

Taxonomy

KingdomThermoproteati
PhylumThermoproteota
ClassThermoprotei
OrderThermoproteales
FamilyThermoproteaceae
GenusPyrobaculum
SpeciesPyrobaculum ferrireducens
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pyrobaculum ferrireducens str. 1860

Accession NumberNC_016645.1

Gene Summary

Adenine Count

531445 bp

Thymine Count

530602 bp

Guanine Count

713321 bp

Cytosine Count

692604 bp

Genome Length

2467972 bp

Protein-coding Genes

2796 genes

Non-Coding Genes

34 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
30s ribosomal protein s8eP186_RS05975Not Available-1081763 - 108215814307.7
gar1/naf1 family proteinP186_RS05980Not Available+1082268 - 10825169428.66
transcription initiation factor iib family proteinP186_RS05985Not Available+1082513 - 108340933031.2
marr family winged helix-turn-helix transcriptional regulatorP186_RS05990Not Available+1083440 - 108388016881.6
rna 2',3'-cyclic phosphodiesteraseP186_RS05995Not Available+1083877 - 108444021359.1
cca trna nucleotidyltransferaseP186_RS06000Not Available+1084437 - 108569647683.6
hypothetical proteinP186_RS06005Not Available+1085734 - 108615315841.2
armt1-like domain-containing proteinP186_RS06010Not Available-1086137 - 108693429749.0
alanine--glyoxylate aminotransferase family proteinP186_RS06015Not Available-1086915 - 108793437572.0
d-2-hydroxyacid dehydrogenaseP186_RS06020Not Available-1087931 - 108885433581.1

Displaying genes 1231 – 1240 of 2830 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

250 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002502,5-didehydro-D-gluconateC6H7O7Chemical structure of 2,5-didehydro-D-gluconate53736-12-2
Average191.1156Da
Monoisotopic191.019177578Da
BASm00002512-dehydropantoateC6H9O4Chemical structure of 2-dehydropantoateNot available
Average145.1333Da
Monoisotopic145.050083776Da
BASm00002634-(hydroxymethyl)benzenesulfonateC7H7O4SChemical structure of 4-(hydroxymethyl)benzenesulfonateNot available
Average187.19Da
Monoisotopic187.007053459Da
BASm0000274aldehydo-D-galacturonateC6H9O7Chemical structure of aldehydo-D-galacturonateNot available
Average193.132Da
Monoisotopic193.0353762Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0000403(S)-acetoinC4H8O2Chemical structure of (S)-acetoinNot available
Average88.1051Da
Monoisotopic88.0524295Da
BASm00004283-oxoadipateC6H6O5Chemical structure of 3-oxoadipateNot available
Average158.11Da
Monoisotopic158.022620453Da

Displaying 1–10 of 250 metabolites