Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Lysobacterales
Family
Lysobacteraceae
Genus
Xanthomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Lysobacterales |
| Family | Lysobacteraceae |
| Genus | Xanthomonas |
| Species | Xanthomonas axonopodis |
| Strain | pv. commiphoreae LMG26789 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
6808 bp
Thymine Count
6463 bp
Guanine Count
11081 bp
Cytosine Count
11054 bp
Genome Length
35406 bp
Protein-coding Genes
46 genes
Non-Coding Genes
0 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lytic murein transglycosylase | Xcom_RS21280 | Not Available | - | 93 - 1370 | 46186.4 |
| hypothetical protein | Xcom_RS21285 | Not Available | - | 1506 - 4494 | 108665.0 |
| site-specific integrase | Xcom_RS21290 | Not Available | - | 4502 - 5776 | 46712.9 |
| dna-binding protein | Xcom_RS21295 | Not Available | + | 5960 - 7015 | 39584.3 |
| xopaf/avrxv3 family type iii secretion system effector | Xcom_RS21300 | Not Available | + | 7405 - 7995 | 21402.2 |
| transposase | Xcom_RS21640 | Not Available | - | 8116 - 8316 | 7605.15 |
| is66 family insertion sequence element accessory protein tnpb | Xcom_RS21305 | Not Available | - | 8505 - 8777 | 9674.91 |
| is66 family insertion sequence element accessory protein tnpa | Xcom_RS21310 | Not Available | - | 8771 - 9073 | 10921.3 |
| hypothetical protein | Xcom_RS21320 | Not Available | + | 9240 - 9447 | 7619.04 |
| type iii secretion system effector avirulence protein avrbs3 | Xcom_RS21325 | Not Available | - | 9558 - 12539 | 105051.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.