Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| major facilitator transporter | JI59_22845 | O31561 | + | 17301 - 18635 | 47003.1 |
| universal stress protein uspa | JI59_22850 | Not Available | + | 19074 - 19673 | 21470.8 |
| copper-binding protein | JI59_22855 | P59571 | + | 19718 - 21487 | 64149.8 |
| copper resistance protein copb | JI59_22860 | P12375 | + | 21775 - 22587 | 29763.4 |
| hypothetical protein | JI59_22870 | Not Available | - | 23997 - 24407 | 15232.4 |
| hypothetical protein | JI59_22875 | Not Available | - | 24438 - 24734 | 11590.8 |
| hypothetical protein | JI59_22880 | Not Available | + | 25219 - 25488 | 10140.7 |
| nitric oxide reductase large subunit | JI59_22885 | Q59647 | - | 25809 - 28112 | 86635.4 |
| cupin | JI59_22890 | Not Available | - | 28281 - 28658 | 13152.9 |
| rrf2 family transcriptional regulator | JI59_22900 | O07573 | - | 28829 - 29317 | 17669.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.