Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JI59_22010 | G9F1Y9 | + | 570759 - 571010 | 8693.79 |
| hypothetical protein | JI59_22015 | Not Available | + | 571044 - 571337 | 9683.38 |
| tonb-dependent receptor | JI59_22025 | P46359 | - | 573388 - 575472 | 75660.6 |
| gaba permease | JI59_22030 | P46349 | - | 575846 - 577234 | 49365.6 |
| omega amino acid--pyruvate aminotransferase | JI59_22035 | Q9A3Q9 | - | 577261 - 578595 | 48334.7 |
| 2-aminoadipate aminotransferase | JI59_22040 | D5AKX9 | + | 578733 - 580199 | 54799.7 |
| aldehyde dehydrogenase | JI59_22045 | O06837 | + | 580325 - 581803 | 52162.3 |
| hypothetical protein | JI59_22055 | Not Available | + | 583766 - 584017 | 9647.36 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | JI59_22060 | O66119 | - | 584118 - 585416 | 44585.4 |
| transketolase | JI59_22065 | A0R0B0 | - | 585419 - 587749 | 84504.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.