Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JI59_21815 | P32008 | - | 526308 - 527234 | 34267.8 |
| hypothetical protein | JI59_21830 | Q9WWW2 | - | 530305 - 531891 | 58057.4 |
| naphthalene 1,2-dioxygenase | JI59_21835 | P11122 | - | 531954 - 532847 | 33409.7 |
| protocatechuate 3,4-dioxygenase | JI59_21840 | P22636 | - | 532943 - 533776 | 30136.1 |
| hypothetical protein | JI59_21845 | Not Available | - | 533809 - 534084 | 10162.0 |
| aldolase | JI59_21850 | Q9X9Q6 | - | 534158 - 535141 | 35833.1 |
| 3-hydroxy-3-methylglutaryl-coa lyase | JI59_21855 | A9WGE2 | - | 535292 - 536227 | 32885.0 |
| coa-transferase | JI59_21860 | A9WGE3 | - | 536227 - 537420 | 43172.9 |
| 3-isopropylmalate dehydratase | JI59_21870 | Q89X98 | - | 538145 - 539545 | 49079.4 |
| hypothetical protein | JI59_21875 | Not Available | + | 539757 - 540266 | 18725.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.