Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| urease accessory protein | JI59_20980 | A8I4R6 | + | 334006 - 334875 | 30726.1 |
| urease subunit gamma | JI59_20985 | Q8UCS6 | + | 334877 - 335179 | 11011.4 |
| urease subunit beta | JI59_20990 | O87401 | + | 335163 - 335504 | 11913.1 |
| urease subunit alpha | JI59_20995 | A3PL38 | + | 335504 - 337213 | 60263.3 |
| urease accessory protein uree | JI59_21000 | B3QGJ9 | + | 337222 - 337767 | 19890.4 |
| urease accessory protein | JI59_21005 | Q133L9 | + | 337724 - 338455 | 26156.1 |
| urease accessory protein ureg | JI59_21010 | Q6N223 | + | 338452 - 339099 | 22720.5 |
| urease/membrane protein | JI59_21015 | P27650 | + | 339096 - 339662 | 18627.1 |
| luxr family transcriptional regulator | JI59_21025 | A0QTK2 | + | 342833 - 343711 | 31342.7 |
| tonb-dependent receptor | JI59_21030 | A1JTG3 | - | 343718 - 346066 | 84017.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.