Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 6-phosphogluconate dehydrogenase | JI59_20880 | P21336 | + | 311137 - 312006 | 30255.4 |
| 4-oxalomesaconate hydratase | JI59_20885 | G2IQQ5 | + | 312003 - 313028 | 38320.7 |
| rieske (2fe-2s) protein | JI59_20890 | O05616 | + | 313033 - 314067 | 38807.5 |
| protocatechuate 3,4-dioxygenase | JI59_20895 | P22635 | + | 314064 - 314474 | 15636.4 |
| protocatechuate 3,4-dioxygenase | JI59_20900 | P22636 | + | 314476 - 315384 | 32963.3 |
| oxidoreductase | JI59_20905 | Q9KWL3 | + | 315415 - 316374 | 35269.8 |
| aldo/keto reductase | JI59_20910 | A2XRZ0 | + | 316374 - 317366 | 35685.4 |
| nodulation protein nfed | JI59_20915 | O59179 | + | 317642 - 318949 | 44726.0 |
| membrane protein | JI59_20920 | O28852 | + | 318979 - 319758 | 29120.3 |
| diguanylate cyclase | JI59_20925 | P77334 | + | 319863 - 320822 | 34958.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.