Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| sugar isomerase | JI59_20825 | Q92S14 | + | 297756 - 299045 | 47052.4 |
| glycoside hydrolase | JI59_20830 | T2KNA8 | + | 299133 - 302573 | 124225.0 |
| arac family transcriptional regulator | JI59_20835 | B7LVD8 | - | 302908 - 303789 | 32902.4 |
| 4-hydroxybenzoate 3-monooxygenase | JI59_20840 | P00438 | + | 303916 - 305085 | 42850.2 |
| protocatechuate 3,4-dioxygenase | JI59_20845 | P22635 | + | 305379 - 305723 | 12381.8 |
| protocatechuate 3,4-dioxygenase | JI59_20850 | P22636 | + | 305728 - 306567 | 31014.7 |
| 2-pyrone-4,6-dicarboxylate hydrolase | JI59_20860 | O87170 | - | 307160 - 308050 | 32847.1 |
| 4-oxalomesaconate tautomerase | JI59_20865 | Q0KJL4 | - | 308043 - 309107 | 36746.1 |
| hypothetical protein | JI59_20870 | G2IQQ8 | - | 309100 - 309774 | 23748.7 |
| lysr family transcriptional regulator | JI59_20875 | Q88JX7 | + | 309874 - 311028 | 41974.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.