Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| d-amino acid oxidase | JI59_20330 | Q8GAI3 | + | 195798 - 197120 | 47472.8 |
| membrane protein | JI59_20335 | Not Available | - | 197498 - 198703 | 45408.6 |
| endoribonuclease | JI59_20340 | Q8U308 | - | 198926 - 199324 | 13996.6 |
| alanine racemase | JI59_20345 | B2DFG5 | - | 199324 - 200469 | 40738.8 |
| aldehyde dehydrogenase | JI59_20350 | H8ZPX2 | - | 200554 - 201993 | 50964.0 |
| lysr family transcriptional regulator | JI59_20355 | P76250 | + | 202128 - 203039 | 33656.4 |
| hypothetical protein | JI59_20360 | Not Available | + | 203413 - 203772 | 12315.4 |
| rod shape-determining protein mreb | JI59_20370 | A0A0H3C7V4 | + | 204668 - 205711 | 36552.5 |
| deor faimly transcriptional regulator | JI59_20375 | P0AA90 | + | 205812 - 207620 | 66322.2 |
| hypothetical protein | JI59_20380 | Not Available | + | 207759 - 207959 | 6717.19 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.