Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| twin-arginine translocation pathway signal protein | JI59_20145 | Not Available | - | 163654 - 164088 | 15463.3 |
| atpase | JI59_20155 | O34431 | + | 165596 - 168157 | 90354.4 |
| cation transporter | JI59_20160 | P45394 | - | 168168 - 169178 | 35482.9 |
| cupin | JI59_20165 | P9WES6 | + | 169575 - 170123 | 19804.2 |
| short-chain dehydrogenase | JI59_20170 | P55541 | + | 170131 - 170880 | 25407.8 |
| hypothetical protein | JI59_20175 | Not Available | + | 171002 - 171400 | 14025.7 |
| methenyltetrahydrofolate cyclohydrolase | JI59_20180 | A5V807 | + | 171636 - 172529 | 30556.5 |
| dihydroneopterin aldolase | JI59_20185 | Q9X8I0 | + | 172597 - 172941 | 12653.4 |
| protocatechuate 3,4-dioxygenase | JI59_20190 | P22636 | - | 172998 - 173894 | 32922.3 |
| protocatechuate 3,4-dioxygenase | JI59_20195 | P22635 | - | 173894 - 174304 | 15352.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.