Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| beta-ketoadipyl coa thiolase | JI59_20025 | Q51956 | + | 143779 - 144981 | 41889.6 |
| phenylacetate-coa oxygenase | JI59_20030 | P76077 | + | 145055 - 146053 | 37474.1 |
| phenylacetate-coa oxygenase | JI59_20035 | P76078 | + | 146078 - 146362 | 10793.8 |
| phenylacetic acid degradation protein | JI59_20040 | P76079 | + | 146362 - 147114 | 27650.5 |
| phenylacetate-coa oxygenase | JI59_20045 | P76080 | + | 147121 - 147624 | 17828.2 |
| phenylacetate-coa oxygenase | JI59_20050 | P76081 | + | 147667 - 148743 | 39562.2 |
| 2,3-dehydroadipyl-coa hydratase | JI59_20055 | P76082 | + | 148736 - 149524 | 27496.4 |
| tetr family transcriptional regulator | JI59_20060 | A0R4Z6 | - | 149533 - 150117 | 21654.8 |
| transposase | JI59_20070 | Q79E92 | + | 150537 - 150806 | 10276.3 |
| atpase | JI59_20085 | Q6AG59 | - | 152736 - 153602 | 30870.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.