Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 3-hydroxyacyl-coa dehydrogenase | JI59_19860 | B1VLT7 | + | 110698 - 111603 | 32092.6 |
| mfs transporter permease | JI59_19865 | P77589 | + | 111600 - 112802 | 42299.1 |
| 3-keto-5-aminohexanoate cleavage protein | JI59_19870 | Q8RHX2 | + | 112792 - 113718 | 33821.6 |
| coa-transferase | JI59_19875 | Q7CXU0 | - | 113734 - 114837 | 38953.6 |
| acyl-coa dehydrogenase | JI59_19880 | Q54R47 | - | 114837 - 116012 | 42356.7 |
| hypothetical protein | JI59_19900 | P59845 | - | 119197 - 120420 | 42639.7 |
| hypothetical protein | JI59_19905 | Not Available | - | 120756 - 121184 | 15444.5 |
| integrase | JI59_19925 | P55646 | + | 122745 - 124328 | 59084.4 |
| pyridoxamine 5'-phosphate oxidase | JI59_19945 | Not Available | - | 125355 - 126020 | 24899.2 |
| hypothetical protein | JI59_19955 | Not Available | - | 127338 - 127997 | 24661.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.