Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| lysr family transcriptional regulator | JI59_19525 | P52689 | - | 34128 - 35033 | 32764.7 |
| alkylhydroperoxidase | JI59_19530 | Not Available | + | 35154 - 35705 | 19283.0 |
| pyridoxamine 5'-phosphate oxidase | JI59_19535 | Not Available | + | 35778 - 36395 | 22628.9 |
| 50s ribosomal protein l21 | JI59_19540 | Not Available | + | 36392 - 36856 | 17545.5 |
| 4-aminobutyrate aminotransferase | JI59_19545 | Q9VU95 | - | 37204 - 38532 | 47537.9 |
| serine kinase | JI59_19550 | A8WFT6 | - | 38582 - 39715 | 40832.0 |
| dehalogenase | JI59_19555 | Q52087 | - | 39869 - 40531 | 25026.2 |
| hypothetical protein | JI59_19560 | Not Available | + | 40927 - 41247 | 11897.2 |
| cold-shock protein | JI59_19565 | P55390 | + | 41803 - 42474 | 23430.2 |
| rna polymerase sigma factor rpod | JI59_19570 | P33452 | + | 42809 - 44845 | 76472.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.