Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | JI59_26085 | Not Available | + | 9438 - 10022 | 20415.0 |
| integration host factor | JI59_26090 | P68573 | - | 10315 - 10590 | 9724.71 |
| transposase | JI59_26100 | P0C1L0 | - | 11489 - 12253 | 29756.0 |
| dtdp-4-dehydrorhamnose 3,5-epimerase | JI59_26105 | P55468 | + | 12574 - 13137 | 20808.3 |
| dtdp-glucose 4,6-dehydratase | JI59_26110 | P55462 | + | 13142 - 14203 | 39170.2 |
| dtdp-4-dehydrorhamnose reductase | JI59_26115 | P55463 | + | 14200 - 15090 | 30279.6 |
| glucose-1-phosphate thymidylyltransferase | JI59_26120 | P55464 | + | 15130 - 15999 | 31715.9 |
| hypothetical protein | JI59_26125 | Not Available | + | 16100 - 16324 | 8246.83 |
| glycosyl transferase family 2 | JI59_26140 | P71054 | - | 18531 - 19280 | 28312.7 |
| hypothetical protein | JI59_26145 | Not Available | - | 19277 - 20761 | 55914.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.