Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Sphingomonadales
Family
Sphingomonadaceae
Genus
Novosphingobium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Sphingomonadales |
| Family | Sphingomonadaceae |
| Genus | Novosphingobium |
| Species | Novosphingobium pentaromativorans |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | non-motile |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | facultative anaerobe |
| Optimal temperature | 29 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Genome Summary
Novosphingobium pentaromativorans US6-1
Accession NumberAGFM00000000.1
Gene Summary
Adenine Count
985378 bp
Thymine Count
988322 bp
Guanine Count
1688404 bp
Cytosine Count
1682870 bp
Genome Length
5344974 bp
Protein-coding Genes
5135 genes
Non-Coding Genes
159 genes
# of Chromosomes/Plasmids
9
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| 2-keto-4-pentenoate hydratase | JI59_24630 | P23149 | + | 39539 - 40351 | 28431.6 |
| acetaldehyde dehydrogenase | JI59_24635 | A2TC44 | + | 40377 - 41315 | 32966.8 |
| 4-hyroxy-2-oxovalerate aldolase | JI59_24640 | A2TC45 | + | 41312 - 42343 | 37008.2 |
| 4-oxalocrotonate decarboxylase | JI59_24645 | Q9KWS3 | + | 42354 - 43124 | 27159.7 |
| 4-oxalocrotonate tautomerase | JI59_24650 | Q8XRG1 | + | 43125 - 43337 | 7304.85 |
| aldehyde dehydrogenase | JI59_24660 | P46368 | + | 43640 - 45139 | 54169.8 |
| 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase | JI59_24665 | O52384 | + | 45182 - 45982 | 28073.6 |
| hypothetical protein | JI59_24670 | Not Available | + | 46055 - 46435 | 13845.8 |
| hypothetical protein | JI59_24675 | P27713 | + | 46690 - 47217 | 18976.9 |
| pyridine nucleotide-disulfide oxidoreductase | JI59_24680 | P37337 | + | 47334 - 48560 | 43936.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.