Pseudarcicella hirudinis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Cytophagia

Order

Cytophagales

Family

Flectobacillaceae

Genus

Pseudarcicella

Description

Pseudarcicella hirudinis is a Gram-negative, rod-shaped bacterium characterized by its aerobic metabolism and non-spore-forming nature. This organism exhibits optimal growth at a temperature of 25.0°C, suggesting a preference for moderate environmental conditions. As a member of the diverse microbial community, Pseudarcicella hirudinis may play a role in various ecological niches, particularly those associated with aerobic environments where organic matter degradation occurs. The rod shape of Pseudarcicella hirudinis may facilitate motility and nutrient uptake in its environment, although specific mechanisms of movement or nutrient acquisition are not detailed in the available traits. The Gram-negative cell wall structure is indicative of a complex membrane system, which may contribute to the organism's adaptability in fluctuating environmental conditions. Understanding the growth characteristics of Pseudarcicella hirudinis could provide insights into its ecological roles, particularly in biogeochemical cycles where aerobic degradation processes are critical. Its ability to thrive at moderate temperatures may also suggest potential interactions with other microorganisms in similar habitats, highlighting the importance of temperature in microbial community dynamics. Further investigations into its metabolic pathways and interactions with other species could elucidate its ecological significance.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassCytophagia
OrderCytophagales
FamilyFlectobacillaceae
GenusPseudarcicella
SpeciesPseudarcicella hirudinis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature25
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Pseudarcicella hirudinis


Gene Summary

Adenine Count

1898889 bp

Thymine Count

1895842 bp

Guanine Count

1189278 bp

Cytosine Count

1176773 bp

Genome Length

6168047 bp

Protein-coding Genes

5010 genes

Non-Coding Genes

58 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phosphatidate phosphatase app1SAMN04515674_10113Not Available+14381 - 1537038234.6
arylsulfatase aSAMN04515674_10114Not Available+15671 - 1714955433.6
protein of unknown functionSAMN04515674_10115Not Available-17193 - 1839245098.0
outer membrane protein assembly factor bamb, contains pqq-like beta-propeller repeatSAMN04515674_10116Not Available-18437 - 1982549358.4
tonb-dependent receptor plug domainSAMN04515674_10117Not Available-19830 - 2222389892.1
yhs domain-containing proteinSAMN04515674_10118Not Available-22531 - 2298617227.4
arac-type dna-binding proteinSAMN04515674_10119Not Available+23239 - 2414434552.6
nad(p)-dependent dehydrogenase, short-chain alcohol dehydrogenase familySAMN04515674_10120Not Available+24319 - 2507728201.1
rnd family efflux transporter, mfp subunitSAMN04515674_10121Not Available+25106 - 2614036465.8
multidrug efflux pump subunit acrbSAMN04515674_10122Not Available+26239 - 29373116164.0

Displaying genes 41 – 50 of 5068 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites