Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, rod-shaped bacterium that exhibits microaerophilic growth characteristics, thriving optimally at 37.0°C. This organism is non-spore-forming, which suggests a reliance on stable environmental conditions for survival and propagation. Its microaerophilic nature indicates that R. columbipharyngis requires reduced levels of oxygen for optimal metabolic activity, which may play a role in its ecological niche and interactions within its environment. In terms of its potential habitat, the specific oxygen requirements and optimal growth temperature suggest that R. columbipharyngis may be adapted to specific biological environments, possibly associated with the respiratory tracts of birds, given the genus name Riemerella. This adaptation may limit its distribution to habitats where microaerophilic conditions prevail, influencing its interactions with other microbial communities and its role in the ecosystem. Understanding these traits can provide insight into how R. columbipharyngis might participate in ecological processes, including nutrient cycling and symbiotic relationships within its host environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis

Accession NumberFNAS00000000.1

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
glycosyltransferase involved in cell wall bisynthesisSAMN05421544_101291Not Available+323889 - 32512746763.5
dtdp-4-amino-4,6-dideoxygalactose transaminaseSAMN05421544_101292Not Available+325120 - 32636146671.8
sugar transferase involved in lps biosynthesis (colanic, teichoic acid)SAMN05421544_101293Not Available+326345 - 32693222675.0
tryptophan synthase beta chainSAMN05421544_101294Not Available-327002 - 32838450843.9
hypothetical proteinSAMN05421544_101295Not Available-328502 - 3286967449.99
uvrd-like helicase c-terminal domain-containing proteinSAMN05421544_101296Not Available+328922 - 33104882461.2
Trna-leuNot AvailableNot Available+331097 - 331178Not Available
hypothetical proteinSAMN05421544_101298Not Available+331416 - 33214428752.4
dna binding domain-containing protein, excisionase familySAMN05421544_101299Not Available+332459 - 33274611311.7
aaa domain-containing proteinSAMN05421544_101300Not Available+332750 - 33382640621.0

Displaying genes 431 – 440 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites