Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, rod-shaped bacterium that exhibits microaerophilic growth characteristics, thriving optimally at 37.0°C. This organism is non-spore-forming, which suggests a reliance on stable environmental conditions for survival and propagation. Its microaerophilic nature indicates that R. columbipharyngis requires reduced levels of oxygen for optimal metabolic activity, which may play a role in its ecological niche and interactions within its environment. In terms of its potential habitat, the specific oxygen requirements and optimal growth temperature suggest that R. columbipharyngis may be adapted to specific biological environments, possibly associated with the respiratory tracts of birds, given the genus name Riemerella. This adaptation may limit its distribution to habitats where microaerophilic conditions prevail, influencing its interactions with other microbial communities and its role in the ecosystem. Understanding these traits can provide insight into how R. columbipharyngis might participate in ecological processes, including nutrient cycling and symbiotic relationships within its host environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis

Accession NumberFNAS00000000.1

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
phosphoglycerate kinaseSAMN05421544_11123Not Available+1440803 - 144199342608.4
glycosyl transferase family 2SAMN05421544_11124Not Available-1442025 - 144292735503.1
adp-heptose:lps heptosyltransferaseSAMN05421544_11125Not Available-1442924 - 144388936987.2
cysteine desulfuration protein sufeSAMN05421544_11126Not Available-1443891 - 144430716114.5
atpase components of abc transporters with duplicated atpase domainsSAMN05421544_11127Not Available-1444358 - 144598061548.3
ssra-binding proteinSAMN05421544_11128Not Available+1446110 - 144656517730.0
thrombospondin type 3 repeat-containing proteinSAMN05421544_11129Not Available+1446643 - 144810052137.1
3-deoxy-d-manno-octulosonate 8-phosphate phosphatase (kdo 8-p phosphatase)SAMN05421544_11130Not Available-1448173 - 144869719367.4
predicted oxidoreductase, contains short-chain dehydrogenase (sdr) and duf2520 domainsSAMN05421544_11131Not Available-1448687 - 144943928354.3
hypothetical proteinSAMN05421544_11132Not Available-1450640 - 145171041419.1

Displaying genes 1521 – 1530 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites