Riemerella columbipharyngis

rodmicroaerophile

Kingdom

Pseudomonadati

Phylum

Bacteroidota

Class

Flavobacteriia

Order

Flavobacteriales

Family

Weeksellaceae

Genus

Riemerella

Description

Riemerella columbipharyngis is a Gram-negative, rod-shaped bacterium that exhibits microaerophilic growth characteristics, thriving optimally at 37.0°C. This organism is non-spore-forming, which suggests a reliance on stable environmental conditions for survival and propagation. Its microaerophilic nature indicates that R. columbipharyngis requires reduced levels of oxygen for optimal metabolic activity, which may play a role in its ecological niche and interactions within its environment. In terms of its potential habitat, the specific oxygen requirements and optimal growth temperature suggest that R. columbipharyngis may be adapted to specific biological environments, possibly associated with the respiratory tracts of birds, given the genus name Riemerella. This adaptation may limit its distribution to habitats where microaerophilic conditions prevail, influencing its interactions with other microbial communities and its role in the ecosystem. Understanding these traits can provide insight into how R. columbipharyngis might participate in ecological processes, including nutrient cycling and symbiotic relationships within its host environment.

Taxonomy

KingdomPseudomonadati
PhylumBacteroidota
ClassFlavobacteriia
OrderFlavobacteriales
FamilyWeeksellaceae
GenusRiemerella
SpeciesRiemerella columbipharyngis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
Mobilitynon-motile
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsmicroaerophile
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
Sporulationnon-spore-forming
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Riemerella columbipharyngis

Accession NumberFNAS00000000.1

Gene Summary

Adenine Count

677005 bp

Thymine Count

678325 bp

Guanine Count

397688 bp

Cytosine Count

383926 bp

Genome Length

2136954 bp

Protein-coding Genes

0 genes

Non-Coding Genes

0 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
upf0042 nucleotide-binding proteinSAMN05421544_10832Not Available-1190285 - 119069515616.7
peptide chain release factor 1SAMN05421544_10833Not Available-1190707 - 119179240754.6
5'-nucleotidaseSAMN05421544_10834Not Available-1191963 - 119272727817.2
carboxyl-terminal processing proteaseSAMN05421544_10835Not Available+1192873 - 119499681760.0
mechanosensitive ion channelSAMN05421544_10836Not Available+1195004 - 119588533245.1
hypothetical proteinSAMN05421544_10837Not Available+1195940 - 119677028999.5
uncharacterized membrane proteinSAMN05421544_10838Not Available+1196773 - 119714413630.2
hypothetical proteinSAMN05421544_10839Not Available+1197173 - 11973767529.22
dna-binding transcriptional response regulator, ntrc family, contains rec, aaa-type atpase, and a fis-type dna-binding domainsSAMN05421544_10840Not Available+1197436 - 119862044001.0
thiol peroxidase, atypical 2-cys peroxiredoxinSAMN05421544_10841Not Available+1198675 - 119917217541.8

Displaying genes 1281 – 1290 of 2189 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites