Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus nigrescens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
570289 bp
Thymine Count
574287 bp
Guanine Count
1794281 bp
Cytosine Count
1801607 bp
Genome Length
4740866 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| deoxyuridine 5'-triphosphate nucleotidohydrolase | SAMN05444351_2459 | Not Available | - | 2470329 - 2470808 | 16324.6 |
| hypothetical protein | SAMN05444351_2460 | Not Available | - | 2470832 - 2471785 | 32195.0 |
| protein of unknown function | SAMN05444351_2461 | Not Available | - | 2471877 - 2472179 | 11231.7 |
| predicted kinase, aminoglycoside phosphotransferase (apt) family | SAMN05444351_2462 | Not Available | + | 2472448 - 2473515 | 38170.6 |
| lytr cell envelope-related transcriptional attenuator | SAMN05444351_2463 | Not Available | + | 2473601 - 2474137 | 18649.1 |
| myo-inositol-1(or 4)-monophosphatase | SAMN05444351_2464 | Not Available | - | 2474174 - 2474986 | 28051.3 |
| polyphosphate glucokinase | SAMN05444351_2465 | Not Available | + | 2475047 - 2475817 | 26788.0 |
| rna polymerase primary sigma factor | SAMN05444351_2466 | Not Available | + | 2476057 - 2477421 | 49337.4 |
| hypothetical protein | SAMN05444351_2467 | Not Available | + | 2477886 - 2478095 | 7519.95 |
| vancomycin resistance protein yoar, contains peptidoglycan-binding and vanw domains | SAMN05444351_2468 | Not Available | + | 2478254 - 2480710 | 81200.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.