Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Geodermatophilales
Family
Geodermatophilaceae
Genus
Geodermatophilus
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Geodermatophilales |
| Family | Geodermatophilaceae |
| Genus | Geodermatophilus |
| Species | Geodermatophilus nigrescens |
| Strain | No strain |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
570289 bp
Thymine Count
574287 bp
Guanine Count
1794281 bp
Cytosine Count
1801607 bp
Genome Length
4740866 bp
Protein-coding Genes
4571 genes
Non-Coding Genes
50 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt | Strand | Coordinates | Molecular Weight |
|---|---|---|---|---|---|
| ribonuclease d | SAMN05444351_2439 | Not Available | + | 2449456 - 2450718 | 44656.3 |
| d-xylose transport system permease protein | SAMN05444351_2440 | Not Available | - | 2450783 - 2452066 | 43431.2 |
| monosaccharide abc transporter atp-binding protein, cut2 family | SAMN05444351_2441 | Not Available | - | 2452066 - 2452863 | 27921.9 |
| monosaccharide abc transporter substrate-binding protein, cut2 family | SAMN05444351_2442 | Not Available | - | 2452938 - 2454047 | 37686.3 |
| acetyl-coa acyltransferase | SAMN05444351_2443 | Not Available | + | 2454289 - 2455494 | 42003.2 |
| 3-hydroxyacyl-coa dehydrogenase | SAMN05444351_2444 | Not Available | + | 2455491 - 2457575 | 73167.1 |
| uncharacterized conserved protein yqgv, upf0045/duf77 family | SAMN05444351_2445 | Not Available | - | 2457736 - 2458020 | 9744.58 |
| 1-deoxy-d-xylulose-5-phosphate synthase | SAMN05444351_2446 | Not Available | - | 2458035 - 2459957 | 67833.9 |
| sugar kinase of the nbd/hsp70 family, may contain an n-terminal hth domain | SAMN05444351_2447 | Not Available | + | 2460164 - 2461348 | 40076.3 |
| hypothetical protein | SAMN05444351_2448 | Not Available | - | 2461412 - 2461768 | 12879.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.