Rhodococcoides fascians D188

Cocci

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Mycobacteriales

Family

Nocardiaceae

Genus

Rhodococcoides

Description

Rhodococcoides fascians D188 is a cocci-shaped bacterium, characterized by its spherical morphology. This organism is classified within the genus Rhodococcoides, which is known for its unique physiological and biochemical properties. While specific information regarding its metabolic capabilities, growth conditions, and ecological roles is limited, the cocci shape suggests a potential adaptation to various environments, possibly allowing it to thrive in diverse habitats. The genus Rhodococcoides is generally associated with the degradation of organic compounds, which may indicate that R. fascians D188 could play a role in biogeochemical cycles, particularly in the breakdown of complex organic materials. Such traits could suggest its involvement in soil health and nutrient cycling, although empirical studies would be necessary to confirm these ecological functions. The distinct spherical form of R. fascians D188 may also influence its interactions within microbial communities, potentially affecting its competitive strategies and symbiotic relationships. Further investigation into its ecological niche and interactions with other microorganisms could provide valuable insights into its functional role in microbial ecosystems. Understanding the specific traits and behaviors of this bacterium will enhance our knowledge of microbial diversity and functionality in various environments.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMycobacteriales
FamilyNocardiaceae
GenusRhodococcoides
SpeciesRhodococcoides fascians
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeCocci
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodococcoides fascians D188


Gene Summary

Adenine Count

911911 bp

Thymine Count

903609 bp

Guanine Count

1660754 bp

Cytosine Count

1663714 bp

Genome Length

5139988 bp

Protein-coding Genes

4783 genes

Non-Coding Genes

61 genes

# of Chromosomes/Plasmids

3

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
enolase c-terminal domain-like proteinA3L23_RS07170Not Available-1556215 - 155756148772.7
aldehyde dehydrogenase (nadp(+))A3L23_RS07175Not Available+1557850 - 155944854659.4
5-dehydro-4-deoxyglucarate dehydrataseA3L23_RS07180Not Available+1559480 - 156040632222.7
glucarate dehydratase family proteinA3L23_RS07185Not Available+1560406 - 156167445298.0
tetr/acrr family transcriptional regulatorA3L23_RS07190Not Available-1561682 - 156232923749.4
sdr family nad(p)-dependent oxidoreductaseA3L23_RS07195Not Available-1562326 - 156317129115.3
nad(p)/fad-dependent oxidoreductaseA3L23_RS07200Not Available-1563168 - 156470657320.1
sulp family inorganic anion transporterA3L23_RS07205Not Available-1564764 - 156625452067.9
ribonuclease jA3L23_RS07210Not Available+1566507 - 156821661545.0
merr family transcriptional regulatorA3L23_RS07215Not Available-1568258 - 156866214999.8

Displaying genes 1451 – 1460 of 5184 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

64 records
Metabolite IDMetabolite nameStructureCAS number
BASm0000237(R)-4'-phosphopantothenateC9H18NO8PChemical structure of (R)-4'-phosphopantothenateNot available
Average299.2149Da
Monoisotopic299.0770031Da
BASm00002543-hydroxy-2-methylpropanoateC4H7O3Chemical structure of 3-hydroxy-2-methylpropanoateNot available
Average103.098Da
Monoisotopic103.0400677Da
BASm0000377(S)-malateC4H4O5Chemical structure of (S)-malateNot available
Average132.0716Da
Monoisotopic132.005873238Da
BASm0000387(6R)-5,10-methylene-5,6,7,8-tetrahydrofolateC20H21N7O6Chemical structure of (6R)-5,10-methylene-5,6,7,8-tetrahydrofolateNot available
Average455.432Da
Monoisotopic455.1564286Da
BASm0000401(S)-2-succinylamino-6-oxoheptanedioateC11H12NO8Chemical structure of (S)-2-succinylamino-6-oxoheptanedioateNot available
Average286.218Da
Monoisotopic286.0579371Da
BASm0001142butanoateC4H7O2Chemical structure of butanoateNot available
Average87.099Da
Monoisotopic87.045153045Da
BASm0001167triphosphateO10P3Chemical structure of triphosphate14127-68-5
Average252.9153Da
Monoisotopic252.8704308Da
BASm00011795-hydroxyisourateC5H4N4O4Chemical structure of 5-hydroxyisourateNot available
Average184.1097Da
Monoisotopic184.0232546Da
BASm0001225dodecanoateC12H23O2Chemical structure of dodecanoateNot available
Average199.3098Da
Monoisotopic199.169805Da
BASm0001429decanoateC10H19O2Chemical structure of decanoateNot available
Average171.2567Da
Monoisotopic171.138504852Da

Displaying 1–10 of 64 metabolites