Neptunomonas qingdaonensis

rodaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Oceanospirillales

Family

Oceanospirillaceae

Genus

Neptunomonas

Description

Neptunomonas qingdaonensis is a Gram-negative, rod-shaped bacterium that thrives in aerobic environments, with an optimal growth temperature of 16.0°C. This microbe was first isolated from marine environments, suggesting a specific adaptation to cooler, oxygen-rich aquatic habitats. The Gram-negative nature of N. qingdaonensis indicates the presence of a thin peptidoglycan layer and an outer membrane, which may contribute to its resilience in fluctuating environmental conditions typically found in marine ecosystems. The preference for lower temperatures and aerobic conditions may reflect its ecological role in decomposing organic matter and recycling nutrients in marine settings. Such metabolic capabilities are critical for maintaining the health of marine ecosystems, particularly in nutrient-rich areas where organic carbon is abundant. Understanding the physiological traits of N. qingdaonensis can provide insights into its potential contributions to biogeochemical cycles in these habitats, as well as its interactions with other microbial communities. Further research into its metabolic pathways and ecological interactions could elucidate its role in marine microbiomes and its responses to environmental changes, particularly in the context of global climate fluctuations affecting ocean temperatures and oxygen levels.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderOceanospirillales
FamilyOceanospirillaceae
GenusNeptunomonas
SpeciesNeptunomonas qingdaonensis
StrainNo strain

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsaerobic
Optimal temperature16
Temperature rangepsychrotolerant
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Neptunomonas qingdaonensis

Accession NumberFOOU00000000.1

Gene Summary

Adenine Count

1190318 bp

Thymine Count

1202146 bp

Guanine Count

1036090 bp

Cytosine Count

1020236 bp

Genome Length

4449795 bp

Protein-coding Genes

4020 genes

Non-Coding Genes

68 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
eal domain, c-di-gmp-specific phosphodiesterase class i (or its enzymatically inactive variant)SAMN05216175_101312Not Available+329556 - 33074344367.4
eal and modified hd-gyp domain-containing signal transduction proteinSAMN05216175_101313Not Available+330874 - 33211546694.9
pas domain s-box-containing protein/diguanylate cyclase (ggdef) domain-containing proteinSAMN05216175_101314Not Available+332176 - 334920102743.0
uncharacterized membrane protein yfcaSAMN05216175_101315Not Available+334920 - 33566927104.4
dihydroxy-acid dehydrataseSAMN05216175_101316Not Available-335735 - 33757965679.8
hypothetical proteinSAMN05216175_101317Not Available+337801 - 3380529314.73
crp/fnr family transcriptional regulator, anaerobic regulatory proteinSAMN05216175_101318Not Available+338045 - 33870424584.8
protein of unknown functionSAMN05216175_101319Not Available+338818 - 3390126894.0
peptidase propeptide and ypeb domain-containing proteinSAMN05216175_101320Not Available+339351 - 3395787776.51
two-component system, ompr family, response regulator phopSAMN05216175_101321Not Available+339594 - 34027125478.4

Displaying genes 321 – 330 of 4088 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites