Campylobacter ureolyticus RIGS 9880

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter ureolyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter ureolyticus RIGS 9880

NZ_CP012195.1

Gene Summary

Adenine Count

584343 bp

Thymine Count

577595 bp

Guanine Count

241327 bp

Cytosine Count

238622 bp

Genome Length

1641887 bp

Protein-coding Genes

1624 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Secretion activator proteinCUREO_RS06040Not Available-1225360 - 122594122580.0
hypothetical proteinCUREO_RS06045Not Available-1225934 - 122629013661.7
hypothetical proteinCUREO_RS06050Not Available-1226449 - 122679613460.3
Tail fiber assembly proteinCUREO_RS06055Not Available-1226793 - 122747325836.0
Tail collar domain-containing proteinCUREO_RS06060Not Available-1227485 - 122821626458.0
Hypothetical proteinCUREO_RS06065Not Available-1228204 - 122885124910.3
Hypothetical proteinCUREO_RS06070Not Available-1228851 - 122996941566.0
Hypothetical proteinCUREO_RS06075Not Available-1229956 - 123029413262.9
Putative baseplate proteinCUREO_RS06080Not Available-1230306 - 123091722379.6
Hypothetical proteinCUREO_RS06085Not Available-1230914 - 123174431108.4

Displaying genes 1 – 10 of 1703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

180 records
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Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0017307L-D-1-Pyrroline-5-carboxylic acidC5H7NO2Chemical structure of L-D-1-Pyrroline-5-carboxylic acid2906-39-0
Average113.1146Da
Monoisotopic113.047678473Da
BASm00173085'-Phosphoribosyl-N-formylglycineamideC8H15N2O9PChemical structure of 5'-Phosphoribosyl-N-formylglycineamideNULL
Average314.1865Da
Monoisotopic314.0515166Da
BASm0017310dTDP-D-GlucoseC16H26N2O16P2Chemical structure of dTDP-D-Glucose2196-62-5
Average564.329Da
Monoisotopic564.075755818Da
BASm0017311Adenylsuccinic acidC14H18N5O11PChemical structure of Adenylsuccinic acid19046-78-7
Average463.2934Da
Monoisotopic463.074042955Da
BASm0017312Palmityl-CoAC37H66N7O17P3SChemical structure of Palmityl-CoA1763-10-6
Average1005.943Da
Monoisotopic1005.344873947Da
BASm00173165,10-Methylene-THFC20H23N7O6Chemical structure of 5,10-Methylene-THF31690-11-6
Average457.4399Da
Monoisotopic457.170981503Da
BASm00173183-Mercaptopyruvic acidC3H4O3SChemical structure of 3-Mercaptopyruvic acid2464-23-5
Average120.127Da
Monoisotopic119.988114684Da
BASm00173214,6-Dideoxy-4-oxo-dTDP-D-glucoseC16H24N2O15P2Chemical structure of 4,6-Dideoxy-4-oxo-dTDP-D-glucoseNULL
Average546.3137Da
Monoisotopic546.065191132Da
BASm0017323Pantetheine 4'-phosphateC11H23N2O7PSChemical structure of Pantetheine 4'-phosphate2226-71-3
Average358.348Da
Monoisotopic358.096358302Da
BASm0017324Coenzyme AC21H36N7O16P3SChemical structure of Coenzyme A85-61-0
Average767.534Da
Monoisotopic767.115208365Da

Displaying 81–90 of 180 metabolites