Campylobacter ureolyticus RIGS 9880

Kingdom

Pseudomonadati

Phylum

Campylobacterota

Class

Epsilonproteobacteria

Order

Campylobacterales

Family

Campylobacteraceae

Genus

Campylobacter

Description

Taxonomy

KingdomPseudomonadati
PhylumCampylobacterota
ClassEpsilonproteobacteria
OrderCampylobacterales
FamilyCampylobacteraceae
GenusCampylobacter
SpeciesCampylobacter ureolyticus
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Campylobacter ureolyticus RIGS 9880

NZ_CP012195.1

Gene Summary

Adenine Count

584343 bp

Thymine Count

577595 bp

Guanine Count

241327 bp

Cytosine Count

238622 bp

Genome Length

1641887 bp

Protein-coding Genes

1624 genes

Non-Coding Genes

79 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProtStrandCoordinatesMolecular Weight
Secretion activator proteinCUREO_RS06040Not Available-1225360 - 122594122580.0
hypothetical proteinCUREO_RS06045Not Available-1225934 - 122629013661.7
hypothetical proteinCUREO_RS06050Not Available-1226449 - 122679613460.3
Tail fiber assembly proteinCUREO_RS06055Not Available-1226793 - 122747325836.0
Tail collar domain-containing proteinCUREO_RS06060Not Available-1227485 - 122821626458.0
Hypothetical proteinCUREO_RS06065Not Available-1228204 - 122885124910.3
Hypothetical proteinCUREO_RS06070Not Available-1228851 - 122996941566.0
Hypothetical proteinCUREO_RS06075Not Available-1229956 - 123029413262.9
Putative baseplate proteinCUREO_RS06080Not Available-1230306 - 123091722379.6
Hypothetical proteinCUREO_RS06085Not Available-1230914 - 123174431108.4

Displaying genes 1 – 10 of 1703 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

180 records
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Mass search
Result columns

Structure search compares stored SMILES, InChI, and InChIKey text. Exact mass must match the stored database value.

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Metabolite IDMetabolite nameStructureCAS number
Average massMonoisotopic mass
BASm0017264Nicotinamide ribotideC11H15NO9PChemical structure of Nicotinamide ribotide1094-61-7
Average336.2119Da
Monoisotopic336.048442595Da
BASm0017265Uridine diphosphate-N-acetylglucosamineC17H27N3O17P2Chemical structure of Uridine diphosphate-N-acetylglucosamine528-04-1
Average607.3537Da
Monoisotopic607.081569477Da
BASm00172663-Methyl-2-oxovaleric acidC6H10O3Not available1460-34-0
Average130.143Da
Monoisotopic130.062994182Da
BASm0017270SAICARC13H19N4O12PChemical structure of SAICAR3031-95-6
Average454.2833Da
Monoisotopic454.073708604Da
BASm0017271NADC21H28N7O14P2Chemical structure of NAD53-84-9
Average664.433Da
Monoisotopic664.116946663Da
BASm0017273N10-Formyl-THFC20H23N7O7Chemical structure of N10-Formyl-THF2800-34-2
Average473.4393Da
Monoisotopic473.165896125Da
BASm0017276PhosphoribosylformylglycineamidineC8H16N3O8PChemical structure of Phosphoribosylformylglycineamidine37721-04-3
Average313.2017Da
Monoisotopic313.067501015Da
BASm0017277Adenosine phosphosulfateC10H14N5O10PSChemical structure of Adenosine phosphosulfate485-84-7
Average427.284Da
Monoisotopic427.019898895Da
BASm0017279D-4'-PhosphopantothenateC9H18NO8PChemical structure of D-4'-PhosphopantothenateNULL
Average299.2149Da
Monoisotopic299.077003069Da
BASm0017280Phosphohydroxypyruvic acidC3H5O7PChemical structure of Phosphohydroxypyruvic acid3913-50-6
Average184.0414Da
Monoisotopic183.977289026Da

Displaying 61–70 of 180 metabolites